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    Introduction


    The pan-genome encompasses all genes within a population, consisting of core genes (presentin all samples), dispensable genes (found in some samples), and unique genes (exclusive tospecific samples). Core genes indicate species stability and are typically linked to species’ biological functions and key traits; dispensable and unique genes reflect species-specific biological attributes and adaptability to particular environments. The pan-genome provides acomprehensive genetic overview of a species and enables comparisons between individual genomes. lt identifies genomic variations like SNPs, InDels, SVs, and PAVs, offering valuable insights into the mechanisms underlying species traits.

    Applications


    Functional gene localization analysis

    Retrieve the missing heritability in complextraits and conduct research on genomicselection breeding

    Population epigenetics studies related todomestication and breeding

    Provide candidate genes and high-quality genome sequences for gene editingresearch

    Highlights


    Unlock all genetic information of a particular species

    Explore the evolution and diversity of the target species

    Fully explore the genetic variation resources of the target species

    Workflow


    Sample Preparation

    Sample Preparation

    Refer to: Sample Submission Guidelines

    Extraction

    Extraction

    Refer to Ultra-long DNA
    Extraction Protocol / DNA
    Extraction Protocol

    Sample QC

    Extraction
    Library Preparation

    Library Preparation

    Refer to Ultra-long DNA Library Construction Workflow
    PacBio Revio DNA Library Construction Workflow

    Library QC

    Library Preparation
    Sequencing

    Sequencing

    Platform: -Short-read Sequencing: Illumina/DNBSEQ;
    -Long-read Sequencing: Nanopore PromethION / PacBio Revio

    Data QC

    Sequencing
    Bioinformatics Ananlysis

    Bioinformatics Ananlysis

    Pan-genome Demo Report

    Click >>

    Analysis Workflow


    GenomePan genome.png

    Publications


    Year Journal Impact Factor Title
    2026 nature genetics 31.8

    Graph pan-genome illuminates evolutionary trajectories and agronomic trait architecture in allotetraploid cotton

    2025

    Science

     

    44.7

    Multispecies pangenomes reveal a pervasive influence of population size on structural variation

    2025 Nature Communications 16.6

    Medicago super-pangenome reveals adaptive advantages and evolutionary constraints in autotetraploid alfalfa

    2025 Nature 69.50

    A pangenome and pantranscriptome of hexaploid oat

    2025 nature genetics 31.8

    A pangenome of maize provides genetic insights into drought resistance

     

    Contact Us

    If you are interested in our long-read sequencing services or potential collaboration, please contact us. Our team is ready to support your research with tailored solutions. We also welcome feedback from users to help us improve our services.

    Contact Us
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    WhatsApp:1-(617)-223-7544

    Tel:16172237544

    Email:service@sailgene.com

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